PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016432509.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 233aa    MW: 25982 Da    PI: 5.4419
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016432509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-174393155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr++  + +Wv+e+r+ps+   +kr++lg++ tae+Aa+a++ a+++l+g
  XP_016432509.1 43 PVYRGVRRRN-NDKWVCELREPST---QKRIWLGSYPTAEMAARAHDVAALALRG 93
                    68*****887.8*********965...4*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.0E-124393IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-2044103IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.5E-2844103IPR001471AP2/ERF domain
PROSITE profilePS5103221.48344101IPR001471AP2/ERF domain
SMARTSM003802.2E-2744107IPR001471AP2/ERF domain
PRINTSPR003675.3E-74556IPR001471AP2/ERF domain
CDDcd000188.84E-2845103No hitNo description
PRINTSPR003675.3E-76783IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MNNSSSCSSV RVAVSDEEDI NILALRKPKK RAGRKKFKET RHPVYRGVRR RNNDKWVCEL  60
REPSTQKRIW LGSYPTAEMA ARAHDVAALA LRGPLATLNF ADSAWRLPVP VSKDPKDLRH  120
AAAKAAEPFW SGEETDVNSR VAANTGNGSE EMKAAAEEDN AVYNCMQNIV TAENVLYSNY  180
SCSEVGMVGT QEWQANMEER SLFSPNPCLL GSCFSWDDDV ESDVEVSLWS YSV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009777001.11e-171PREDICTED: uncharacterized protein LOC104226669
RefseqXP_016432509.11e-173PREDICTED: dehydration-responsive element-binding protein 1F-like
TrEMBLA0A1S3WY251e-172A0A1S3WY25_TOBAC; dehydration-responsive element-binding protein 1F-like
TrEMBLA0A1U7WIB71e-170A0A1U7WIB7_NICSY; uncharacterized protein LOC104226669
STRINGXP_009777001.11e-171(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.12e-36ERF family protein