PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016434211.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 431aa    MW: 46926.9 Da    PI: 6.5567
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016434211.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1331.3e-10232290563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr++r   NR +A rs +RK  +i eLe+kv++L++e ++L  +l  l+     l++e+
  XP_016434211.1 232 KRAKRIWANRQSAARSKERKMRYITELERKVQTLQTETTTLSAQLTLLQRDTNGLTAEN 290
                     9*********************************************9998888777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.8E-15228292IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.001230293IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.03E-11232283No hitNo description
Gene3DG3DSA:1.20.5.1702.4E-9232286No hitNo description
PfamPF001705.0E-9232286IPR004827Basic-leucine zipper domain
CDDcd147031.74E-18233282No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MDKDKSSSHA VGSLPPFGRY SLFSPPGGSS NAKLEQSGLA NLPPLGPGNA SESGHFGHGL  60
SADSSRFSHD ISRMPDNPPK KFGHRRAHSE ILTLPDDISF DSDLGVVGGL DGPSLSDETE  120
EDFLSMYLDM DKFNSSSVSS DFQVGESSSS AAAASGSLQI PAMASAASGS DNLGPTVSAK  180
PRVRHQHSQS MDGSTTIKPE MLMSGVDEAS PLETKKATSA AKLAELALVD PKRAKRIWAN  240
RQSAARSKER KMRYITELER KVQTLQTETT TLSAQLTLLQ RDTNGLTAEN SELKLRLQTM  300
EQQVHLQDAL NDALKEEIQH LKVLTGQGIA NGGPMMNFPT SFGGNQQFYS NNHAMHTLLA  360
AQQLQQLQIH SHKQQHQFQQ HQLHQFQQQQ QLQHQQQLQE QLHQAGDMNS RSSLSSPQND  420
NASDTSAISK D
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016434211.10.0PREDICTED: probable transcription factor PosF21
SwissprotQ040881e-149POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A1S3X3100.0A0A1S3X310_TOBAC; probable transcription factor PosF21
STRINGXP_009799286.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39652137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-123bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]