PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016440974.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 227aa    MW: 25755.7 Da    PI: 7.7905
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016440974.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.7e-1999148356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr+++ +g+W+AeIrdp     +  +r++lg+f taeeAa+a+++ + +++ge
  XP_016440974.1  99 YRGVRQRP-WGKWAAEIRDP-----HkaQRVWLGTFVTAEEAARAYDKKAVEFRGE 148
                     9*******.**********7.....337************************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.84198155IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-2298157IPR016177DNA-binding domain
SMARTSM003805.3E-3698161IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-3298156IPR001471AP2/ERF domain
PRINTSPR003671.1E-1199110IPR001471AP2/ERF domain
PfamPF008473.5E-1299148IPR001471AP2/ERF domain
CDDcd000184.37E-3099157No hitNo description
PRINTSPR003671.1E-11121137IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MYHHHTLTQD QEFYFMVSAL RHVISGADGR ADGEAAQLLR EVENASAVTS ASILRRRSIV  60
EPTASATTYL ACRTSFHVKP ENLELQKGRK RRRNTKKEYR GVRQRPWGKW AAEIRDPHKA  120
QRVWLGTFVT AEEAARAYDK KAVEFRGEKA KTNFPISEYA TTVSTDHNNK LPLVVEDQLQ  180
VQNGLYNGEV KVAGDDNGES STQNGDDFWD TLEDDGLVKW ITKDMSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-2197156464ATERF1
3gcc_A2e-2197156464ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18892RKRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016440974.11e-171PREDICTED: ethylene-responsive transcription factor ERF071-like
TrEMBLA0A1S3XMC11e-169A0A1S3XMC1_TOBAC; ethylene-responsive transcription factor ERF071-like
STRINGXP_009587871.11e-144(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.25e-31ERF family protein