PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016446355.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 151aa    MW: 17464.4 Da    PI: 6.9066
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016446355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.51e-131011736128
             NAM  36 evdiykv.ePwdLpk..........kvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk.....kgelvglkktLvfykgr 112
                     ++d+y   ePw++ +            +a+++++ yf +k +kk++     nr + ++g Wk++ k k+v+ +     +  ++g+kk+L + +++
  XP_016446355.1  10 NIDVYGGeEPWEIYNhgvscgndddD-NADSSNYrYFITKLKKKSKA--GYNReVGNKGSWKQQDKAKSVHYEnvgnsSLVVIGCKKSLCYVNKE 101
                     56777643899997446666554421.12222332666655555443..445547889************998665433444************9 PP

             NAM 113 apkgektdWvmheyrl 128
                       + +  +W+m+ey+l
  XP_016446355.1 102 YYNQNDGHWLMKEYEL 117
                     99*9**********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100515.8331140IPR003441NAC domain
SuperFamilySSF1019412.22E-1317138IPR003441NAC domain
PfamPF023653.7E-818117IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MNDSGFITTN IDVYGGEEPW EIYNHGVSCG NDDDDNADSS NYRYFITKLK KKSKAGYNRE  60
VGNKGSWKQQ DKAKSVHYEN VGNSSLVVIG CKKSLCYVNK EYYNQNDGHW LMKEYELSSV  120
ILQKFDEDRR DYVLCAIKRM PHSTDYARCL N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016446354.11e-110PREDICTED: NAC domain-containing protein 78-like isoform X1
TrEMBLA0A1S3Y2J41e-109A0A1S3Y2J4_TOBAC; NAC domain-containing protein 78-like isoform X1
STRINGXP_009766553.11e-106(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.16e-06NAC domain containing protein 2