PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016448792.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 121aa    MW: 14043.4 Da    PI: 5.0513
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016448792.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.13e-116387226
         G2-like  2 prlrWtpeLHerFveaveqLGGsek 26
                    prlrWtp+LH +Fv+a+e+LGG+e+
  XP_016448792.1 63 PRLRWTPDLHLSFVRAIERLGGQEN 87
                    8*********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.9E-95986IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    Send to blast
MEKVSYSIDL NEEANNKRET DETIELSDDM IEKTAEGNSS SEDIGNYENK SSRVRQYVRS  60
KLPRLRWTPD LHLSFVRAIE RLGGQENDEC ERTQHCPCKK SSADVSKQET WRVWTSTRPC  120
S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016448792.11e-85PREDICTED: uncharacterized protein LOC107773880 isoform X2
TrEMBLA0A1S3Y9Y83e-84A0A1S3Y9Y8_TOBAC; uncharacterized protein LOC107773880 isoform X2
STRINGXP_009607761.17e-53(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.14e-17G2-like family protein