PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016449500.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 335aa    MW: 38773 Da    PI: 4.4055
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016449500.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.82.9e-25121432128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                     p+G rFhPtd e++ +yL   v++++l+ ++  ++ +d+y   ePw++ +   + +++++  yf ++++k+++t kr +r++ +g+Wk +gk +e
  XP_016449500.1  12 PMGHRFHPTDREVL-KYLIGFVRDDPLHSQNElMQVADLYADkEPWQIFEaydQGNNNNNTRYFITPQKKEKPTWKRVSRTVGKGTWKPQGKGRE 105
                     89**********99.9**********88766647777*997559****74232333344467********************************* PP

             NAM  92 vlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                     v++ kg+l+g  k+L +   +++++ ++ +W+m ey+l
  XP_016449500.1 106 VFDDKGRLMGYVKSLKYIpANKSSNNVNGEWLMTEYSL 143
                     ******************656888889*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-288166IPR003441NAC domain
PROSITE profilePS5100528.61711166IPR003441NAC domain
PfamPF023651.2E-1212143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MEYSQAKCFS RPMGHRFHPT DREVLKYLIG FVRDDPLHSQ NELMQVADLY ADKEPWQIFE  60
AYDQGNNNNN TRYFITPQKK EKPTWKRVSR TVGKGTWKPQ GKGREVFDDK GRLMGYVKSL  120
KYIPANKSSN NVNGEWLMTE YSLFDRYLAA REIKNKGFVI CKIKKKGKPG DKKKGNNIDE  180
VVNDENMRDI EEFINTVLQE DVQVEDNGIR SNGTIAKLDD QENNIIQYVE GDQVRDHVLG  240
LLDSTEDIVD VNDHEEYVED CVDEGVEVQV HLLEEYIDSV LQSEDVQAED NGMMSSNDII  300
AKDDEENMEY QVEDNQHATF WASPKDVDMD TINFC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016449500.10.0PREDICTED: NAC domain-containing protein 37-like
TrEMBLA0A1S3YBB30.0A0A1S3YBB3_TOBAC; NAC domain-containing protein 37-like
STRINGXP_009762991.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36160.11e-15NAC domain containing protein 76