PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016456237.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 166aa    MW: 19507.3 Da    PI: 10.0712
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016456237.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.53.5e-12139843128
             NAM  43 ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy.kg.rapkgektdWvmheyrl 128
                      Pw++  +   eek   f s+ +k++++ kr +r+ ++ +Wk + +  ++++ kg++vg +k++v+  +g +++k  k +W+m ey +
  XP_016456237.1  13 PPWEISDH--PEEKIGCFISPLKKRKESHKRFRRTCANWTWKGQNSGDPIKNGKGTVVGFRKSFVYRtRGsKQSKQDKINWLMREYYV 98 
                     68999732..2344458999999999999*****9999****************************96444777888*********75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.7491121IPR003441NAC domain
SuperFamilySSF1019412.09E-1712120IPR003441NAC domain
PfamPF023653.6E-62797IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MPYSIAEIYG DRPPWEISDH PEEKIGCFIS PLKKRKESHK RFRRTCANWT WKGQNSGDPI  60
KNGKGTVVGF RKSFVYRTRG SKQSKQDKIN WLMREYYVGD DYFRENNISK QDIVLCRIKK  120
NIITKRIMKN GVTIEEQEVA QVIEDMLREP DYNSTQSATI ANNIRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016456237.11e-122PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1S3YWA61e-120A0A1S3YWA6_TOBAC; NAC domain-containing protein 78-like
STRINGXP_009787362.12e-91(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.11e-10NAC domain containing protein 32