PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016457112.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 154aa    MW: 18079.5 Da    PI: 10.8228
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016457112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.92e-196313363128
             NAM  63 krdkkyatgk...rknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrap.kgektdWvmheyrl 128
                     ++ +k +tg    r  rat sgyWk  g dk++++  ++ + g+kktLvfykgr++ ++ ktdW+mheyrl
  XP_016457112.1  63 SATRKPNTGMeikRIYRATVSGYWKPPGLDKQITCPrGKPVLGMKKTLVFYKGRKShHAFKTDWIMHEYRL 133
                     33444444442227777899***************9445568**********96651667*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.5341148IPR003441NAC domain
PfamPF023652.9E-1120133IPR003441NAC domain
SuperFamilySSF1019411.09E-1873137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MKQHRHDIHK PLIFYSCTLK YLKPRSSLSR ADSQSLAEPP YSKACQLTPV YWKITLCRTY  60
IVSATRKPNT GMEIKRIYRA TVSGYWKPPG LDKQITCPRG KPVLGMKKTL VFYKGRKSHH  120
AFKTDWIMHE YRLVLPINPL FIFFIISRNL LRIP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016457112.11e-111PREDICTED: NAC domain-containing protein 92-like
TrEMBLA0A1S3YZ381e-110A0A1S3YZ38_TOBAC; NAC domain-containing protein 92-like
STRINGXP_009615559.11e-110(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2415222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.14e-19NAC domain containing protein 83