PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016457978.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 168aa    MW: 19695.6 Da    PI: 9.8281
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016457978.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.58.9e-22421606126
             NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                     +F+P+d +l+++ L k ++gk l++e  i  +d+y+ eP +L   ++ + k  yf ++ +kk++t+ r nr+t +g+W ++ k k++l++ ++  
  XP_016457978.1  42 QFRPSDTDLITQ-LLKFMAGKCLPTEGLIGFADVYSNEPLQLIGDIS-SMKTHYFLTQLKKKKPTDARFNRTTGNGTWTQQNKGKKILDEdESLI 134
                     7*********77.556788888899899**************86664.467889999********************************845556 PP

             NAM 100 vglkktLvfykgrapkgektdWvmhey 126
                     +g k++L +   ++ ++ +  W+m ey
  XP_016457978.1 135 IGYKRSLSYK-HKKDSSLNGYWMMTEY 160
                     9*******98.5666669********* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.98337168IPR003441NAC domain
SuperFamilySSF1019411.14E-1942163IPR003441NAC domain
PfamPF023651.9E-1142160IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MRPQIFIWVL AVVTCYARRM NDKLLTNQKX QERTEPMEKN PQFRPSDTDL ITQLLKFMAG  60
KCLPTEGLIG FADVYSNEPL QLIGDISSMK THYFLTQLKK KKPTDARFNR TTGNGTWTQQ  120
NKGKKILDED ESLIIGYKRS LSYKHKKDSS LNGYWMMTEY FCWDFKLV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532651e-163EU753265.1 Nicotiana tabacum NAC transcription factor (NAC8) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016457978.11e-124PREDICTED: uncharacterized protein LOC107781745
TrEMBLA0A1S3Z0Q61e-122A0A1S3Z0Q6_TOBAC; uncharacterized protein LOC107781745
STRINGXP_009611780.16e-90(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9815725
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04060.18e-12NAC domain containing protein 46