PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016458602.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 241aa    MW: 27983.5 Da    PI: 6.2492
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016458602.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.67.2e-21131416128
             NAM   6 rFhP.tdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk......kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdke 91 
                     +F+P +d++l+  yL+k v g ++e+ + i ++d+y   +P +L +      + +++++  yfF++ +kk+a+gk+ nr +t  g Wk   ++k+
  XP_016458602.1  13 EFQPyNDQDLI-SYLQKFVCGMPIET-DRIGHIDVYGNkKPCELFQdllcskEETSNDHVNYFFTQLKKKSASGKNYNRsITGGGSWKGRDTSKA 105
                     79995688898.9*************.88******97549****64466542222233455******************9999************ PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     v++k+g+ +glkkt+ f + + ++ ++  W m+ey l
  XP_016458602.1 106 VHDKEGSIIGLKKTFRFDE-ECSDHQRIVWNMKEYCL 141
                     *****************96.555559*********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.7938168IPR003441NAC domain
PfamPF023657.1E-1013141IPR003441NAC domain
SuperFamilySSF1019417.72E-1914167IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MTTKSERRKC TTEFQPYNDQ DLISYLQKFV CGMPIETDRI GHIDVYGNKK PCELFQDLLC  60
SKEETSNDHV NYFFTQLKKK SASGKNYNRS ITGGGSWKGR DTSKAVHDKE GSIIGLKKTF  120
RFDEECSDHQ RIVWNMKEYC LSDNILEVLR QRCQIRHEDY VLCSVERKVN LCKHSQDIPS  180
EISSSALRYG GWPLYTELTK LPPLIDGPFE SLTEEELAFF DNPDPGYPQA YEKAYFNFYS  240
N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009607153.10.0PREDICTED: NAC domain-containing protein 76-like
RefseqXP_016458602.10.0PREDICTED: NAC domain-containing protein 76-like
TrEMBLA0A1S3Z3560.0A0A1S3Z356_TOBAC; NAC domain-containing protein 76-like
STRINGXP_009607153.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33811041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.11e-14NAC domain containing protein 52