PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016459318.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family C2H2
Protein Properties Length: 151aa    MW: 16938.4 Da    PI: 9.954
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016459318.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.000423658123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C+k+Fs+   L  H  +H
  XP_016459318.1 36 FECKTCNKRFSSFQALGGHRTSH 58
                    89**********99998888777 PP
2zf-C2H212.70.0003780102123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg+ F     L  H+r+H
  XP_016459318.1  80 HQCSICGMEFFMGQALGGHMRRH 102
                     79********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.113658IPR015880Zinc finger, C2H2-like
PfamPF139121.4E-113660IPR007087Zinc finger, C2H2
SuperFamilySSF576671.27E-836102No hitNo description
PROSITE profilePS5015710.8663663IPR007087Zinc finger, C2H2
PROSITE patternPS0002803858IPR007087Zinc finger, C2H2
SMARTSM003550.09380102IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.09980107IPR007087Zinc finger, C2H2
PfamPF139124.2E-980104IPR007087Zinc finger, C2H2
PROSITE patternPS00028082102IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MAAMKRSRED DSEVEAQAMA NCSMLLSRLN NNTSSFECKT CNKRFSSFQA LGGHRTSHKS  60
LRSSSIDARS KSKKPKNNMH QCSICGMEFF MGQALGGHMR RHRAPVNVPV LNKSNSSKRI  120
LCLDLNLTPD DQNDDFMLWP TAPAPVLRCF I
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009779269.11e-109PREDICTED: zinc finger protein ZAT11-like
RefseqXP_016459318.11e-109PREDICTED: zinc finger protein ZAT11-like
SwissprotQ9SLD42e-35ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A1S3Z4I91e-108A0A1S3Z4I9_TOBAC; zinc finger protein ZAT11-like
TrEMBLA0A1U7WX561e-108A0A1U7WX56_NICSY; zinc finger protein ZAT11-like
STRINGXP_009779269.11e-109(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36624150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.18e-38C2H2 family protein