PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016463042.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family EIL
Protein Properties Length: 655aa    MW: 72643 Da    PI: 6.7068
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016463042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3423.52.2e-129383661319
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     eel++rmwkd+++lkrlker+k     + +a++++++++ ++qarrkkmsraQDgiLkYMlk mevcna+GfvYgiip+kgkpv+gasd++raWW
  XP_016463042.1  38 EELERRMWKDRIKLKRLKERQKLA---ALKAAEKQNNKQVTDQARRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPDKGKPVSGASDNIRAWW 129
                     8*******************9964...34457899999********************************************************* PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS
            EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190
                     kekv+fd+ngpaai+ky+a++ + +++ ++  ++ +  + l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+ww++ gl+k q
  XP_016463042.1 130 KEKVKFDKNGPAAIAKYEAECRAKGEGVGS--QNGNAGSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVSPPWWPTGNEEWWSKTGLPKGQ 222
                     **********************99988888..56888999******************************************************* PP

                     -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX......XXXXXXXXXXXX CS
            EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss......slrkqspkvtls 277
                     + ppykkphdlkk+wkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes ++l+vl++ee+++++  ++  ss       +r++++k  +s
  XP_016463042.1 223 N-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRLVRQSKCLQDKMTAKESSIWLAVLSREESILQQPGSEngSSsieppaRSRSEKKKPSFS 316
                     *.9******************************************************************999966336888777788999999** PP

                     XXXXXXXXXXXXXX.XXXXXXXXXX..................XXXXXXXXXXXXXXXXX CS
            EIN3 278 ceqkedvegkkeskikhvqavktta..................gfpvvrkrkkkpsesak 319
                     +++ +dv+g ++     ++++++++                  +          +++ + 
  XP_016463042.1 317 SDSVYDVDGVDDGIGCVSSKDERRNqpldvhplnaipqshqskE----------QGDGRH 366
                     ********444443333333333334445555544443333220..........222222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048738.3E-12538285No hitNo description
Gene3DG3DSA:1.10.3180.103.9E-71163291IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.44E-61167288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 655 aa     Download sequence    Send to blast
MAVIDEIGVD VSSDIEVDDI RCDNIAEKDV SDEEIEPEEL ERRMWKDRIK LKRLKERQKL  60
AALKAAEKQN NKQVTDQARR KKMSRAQDGI LKYMLKLMEV CNARGFVYGI IPDKGKPVSG  120
ASDNIRAWWK EKVKFDKNGP AAIAKYEAEC RAKGEGVGSQ NGNAGSVLQD LQDATLGSLL  180
SSLMQHCDPP QRKYPLEKGV SPPWWPTGNE EWWSKTGLPK GQNPPYKKPH DLKKMWKVGV  240
LTAVIKHMSP DIAKIRRLVR QSKCLQDKMT AKESSIWLAV LSREESILQQ PGSENGSSSI  300
EPPARSRSEK KKPSFSSDSV YDVDGVDDGI GCVSSKDERR NQPLDVHPLN AIPQSHQSKE  360
QGDGRHRRRK RARSNPTEQQ ILPSLRHGDD DSNSLPDTNS SGSVRENDKS GAQKPVENNI  420
VTQSELPLLD SNLSLVPSAN VVFTEDAYIG TGPSLYPMSQ NSAVVPYEAG AHLGSQDSAV  480
QHQFHDTQFH GHHKIPGIND VPQNSHLHYG SHSSVVHTLL QVSGFAHGSQ FSNLNQPPLY  540
HSYSSAEFGS THEKPQSHLA CNELPIRPRD SGVGSLLHGS GNNITVDNHH YGKDMSQNNH  600
DTHIEIPFPS PLTIGSPDYA TLGSPFDLGL DVQSFLDNTD FDLDFDKEMM SFFAS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A8e-7416729611140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY3532480.0AY353248.1 Petunia x hybrida EIL1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016463042.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_016463043.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-173EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A1S3ZF270.0A0A1S3ZF27_TOBAC; ETHYLENE INSENSITIVE 3-like 3 protein
STRINGPGSC0003DMT4000551020.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-145ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]