PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_016471095.1

Organism

Nicotiana tabacum

Taxonomic ID

4097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 199aa MW: 23732 Da PI: 8.6672

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_016471095.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43	9.7e-14	57	116	3	62
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +lk+ rr +NR++A+rsR +K ++i eLe+kvk L+ L e+e++k++ + l+++ XP_016471095.1 57 DLKKLRRTVSNRLSAQRSRIKKTEYITELEKKVKDLQDTIAYLSPEIENYKEKQSMLRMQ 116 79**************************************************98887765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.5E-8	55	119	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.369	57	120	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.6E-13	58	116	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.21E-11	58	114	No hit	No description
Gene3D	G3DSA:1.20.5.170	5.4E-13	59	116	No hit	No description
CDD	cd14703	4.48E-10	60	110	No hit	No description
PROSITE pattern	PS00036	0	62	77	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence Send to blast
MEDKRKRSEP ELALSLKSPT DNQDELSVNR RKVPLTLDQA IDFELNKLGR NVDSDVDLKK 60 LRRTVSNRLS AQRSRIKKTE YITELEKKVK DLQDTIAYLS PEIENYKEKQ SMLRMQRKYL 120 QEQLDTFTDR SKLRTVQIEE MKLELRRLKE LAKAQEEHYN MQLGQTTNYF YLSEMEQQAG 180 IDQYLNLDAM NFYPPKNEM

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009783967.1	1e-142	PREDICTED: basic leucine zipper 19
Refseq	XP_016471095.1	1e-142	PREDICTED: basic leucine zipper 19-like
TrEMBL	A0A1S4A3A8	1e-140	A0A1S4A3A8_TOBAC; basic leucine zipper 19-like
TrEMBL	A0A1U7WVP3	1e-140	A0A1U7WVP3_NICSY; basic leucine zipper 19
STRING	XP_009783967.1	1e-141	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7615	19	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	2e-10	bZIP family protein