PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016472235.1
Common NameERF168
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 217aa    MW: 24177.8 Da    PI: 7.13
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016472235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11e-1894144255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y GVrw++ +g+++AeIrdp  +g  +r +lg++ t+e+Aa a+++a+ k++g
  XP_016472235.1  94 RYIGVRWRP-WGKFAAEIRDPDRRG--ARLWLGTYETPEDAALAYDQAAFKIRG 144
                     699******.**********95454..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.5E-1494144IPR001471AP2/ERF domain
CDDcd000181.25E-2794154No hitNo description
Gene3DG3DSA:3.30.730.105.7E-3094153IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-2394153IPR016177DNA-binding domain
SMARTSM003802.4E-3394158IPR001471AP2/ERF domain
PROSITE profilePS5103222.64294152IPR001471AP2/ERF domain
PRINTSPR003673.6E-1195106IPR001471AP2/ERF domain
PRINTSPR003673.6E-11134154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MNPADNATFS FSDLDFLDSI DHHLLINSDF SNSFSPMSSS NVATPNSRSS SFGSCLLDEN  60
IEETTTLESQ SETEEQTQGG KAARERNTKQ DWRRYIGVRW RPWGKFAAEI RDPDRRGARL  120
WLGTYETPED AALAYDQAAF KIRGSRARLN FPHLIGSNMP EPARVKGSCH NSCSLEPSSS  180
SSTPLSENGT RKRNIDVINS IAKAKSVGHI RNLHMLL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-2793152160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB8281510.0AB828151.1 Nicotiana tabacum ERF168 mRNA for ethylene response factor 168, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001312505.11e-161ethylene-responsive transcription factor 2-like
TrEMBLS0BBR21e-160S0BBR2_TOBAC; Ethylene response factor 168
STRINGXP_009609535.11e-159(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.17e-36ethylene-responsive element binding factor 13
Publications ? help Back to Top
  1. Shoji T,Kajikawa M,Hashimoto T
    Clustered transcription factor genes regulate nicotine biosynthesis in tobacco.
    Plant Cell, 2010. 22(10): p. 3390-409
    [PMID:20959558]