PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016473927.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 463aa    MW: 52251.1 Da    PI: 4.4737
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016473927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.29.7e-21161503128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      G+rF+Ptdeel+  +L k v+ k++++ ++i+  d+y   +Pwd+  +++ +e++++ yfF+k ++++a g r +r  +  g Wk   k k+v+
  XP_016473927.1  16 IGIRFRPTDEELI-LFLLKFVSCKNFSC-DHIRVEDLYGNkKPWDIFeNNFLGEDTKVnYFFTKLKRTKAGGLRFSRgLIGGGSWKGLDKRKPVF 108
                     69***********.89999*********.88**99*996549****6445555555445******************999*************** PP

             NAM  94 skkgelvglkktLvfy........kgrapkgektdWvmheyrl 128
                     + +++lvg kk++ +          g ++  ++  W m+ey+l
  XP_016473927.1 109 K-GSKLVGFKKSFRYQeedscteeLGGDRGIKNIVWNMKEYSL 150
                     9.9*************5554443325555556889******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.27E-2310177IPR003441NAC domain
PROSITE profilePS5100523.86414177IPR003441NAC domain
PfamPF023656.0E-1216150IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
MMSSKTSHNN SPYPVIGIRF RPTDEELILF LLKFVSCKNF SCDHIRVEDL YGNKKPWDIF  60
ENNFLGEDTK VNYFFTKLKR TKAGGLRFSR GLIGGGSWKG LDKRKPVFKG SKLVGFKKSF  120
RYQEEDSCTE ELGGDRGIKN IVWNMKEYSL NVDILKVLRQ RNSIQYEDFV LCCIKRKSVH  180
GNDHKELGNM MPMEIAASGN NVVDVMNDML STAPEHDLDY VTSSSEDQGT YFHDFCPSNQ  240
FSSSEHNNVF DQLQQDQNIE QLVNVQAQNI EEMAPSAQSH VDYVGSSSEE GTVASNKFTY  300
SPDNNDFELQ QDHNIECDDR ATVPSTLAEI MKNIDHVDRK VYEYIGSLLA EKSNTAEPQL  360
PDESMAQGSS TAMVNEENIN AGFVSDQWSI EQVHNIEDRA PITFTGMLSS SDYYAKTSTT  420
ALVINSDECF TMEELLASDD DVIAADLAWM PTQWAGSLNQ VIN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016473927.10.0PREDICTED: NAC domain-containing protein 68-like
TrEMBLA0A1S4AB950.0A0A1S4AB95_TOBAC; NAC domain-containing protein 68-like
STRINGXP_009597084.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10426625
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.17e-17NAC domain containing protein 2