PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016474545.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 232aa    MW: 27010.7 Da    PI: 9.9938
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016474545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM76.46.8e-24111423128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                     +G rFhPtd e++ +yL   v++++l+l++  ++ +d+y   ePw++ +      +++++  yf ++++k+++t kr +r++ +g+Wk + k ++
  XP_016474545.1  11 MGHRFHPTDREVL-KYLVGFVRNEPLPLQNElMQVADLYADkEPWQIFEaydrGNNNNNNTRYFITPQKKEKPTWKRVSRTVGKGTWKLQNKGRD 104
                     79*********99.9**********99987746666*997559****642442222344466********************************* PP

             NAM  92 vlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                     v++ kg+l+g  k+L +   +++++ ++ +W+m ey+l
  XP_016474545.1 105 VFDDKGRLMGYVKSLKYIpANKSSNNVNGEWLMTEYSL 142
                     ******************656888889*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.5E-289165IPR003441NAC domain
PROSITE profilePS5100527.2849165IPR003441NAC domain
PfamPF023651.4E-1211142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MAENSSSHRS MGHRFHPTDR EVLKYLVGFV RNEPLPLQNE LMQVADLYAD KEPWQIFEAY  60
DRGNNNNNNT RYFITPQKKE KPTWKRVSRT VGKGTWKLQN KGRDVFDDKG RLMGYVKSLK  120
YIPANKSSNN VNGEWLMTEY SLFDRYLVAG EIKNKGFVIC KIKKKGKPGD KKKGNNIEEV  180
VNDEKMREIE EFIKSVLQED VQVEDNGIRS SGTIAKDXIL LMTWMMRMFN IA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016474545.11e-172PREDICTED: NAC domain-containing protein 101-like
TrEMBLA0A1S4ACZ71e-170A0A1S4ACZ7_TOBAC; NAC domain-containing protein 101-like
STRINGXP_009601217.11e-153(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.12e-14NAC-domain protein 101