PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_016476258.1

Organism

Nicotiana tabacum

Taxonomic ID

4097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 290aa MW: 33178.9 Da PI: 7.991

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_016476258.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	155.1	3e-48	10	137	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPt+eel+++yLk+kv g kl++ +vi ++iy+++PwdLp ++ +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d++++s+ XP_016476258.1 10 LPGFRFHPTEEELLQFYLKNKVLGLKLRC-DVIGLLNIYRHDPWDLPGLATIGEREWYFFVPRDRKHGSGGRPNRTTQKGFWKATGSDRKIFSSs 103 59*************************.99***********8777899**********************************986 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkktLvfy+grap+g+ktdWvm+e+rl XP_016476258.1 104 hPKNIIGLKKTLVFYNGRAPRGSKTDWVMNEFRL 137 66677*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	54.453	9	155	IPR003441	NAC domain
SuperFamily	SSF101941	2.62E-56	9	155	IPR003441	NAC domain
Pfam	PF02365	9.8E-26	11	137	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009965	Biological Process	leaf morphogenesis
GO:0010200	Biological Process	response to chitin
GO:0045792	Biological Process	negative regulation of cell size
GO:0048281	Biological Process	inflorescence morphogenesis
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence Send to blast
MGESAMEFAL PGFRFHPTEE ELLQFYLKNK VLGLKLRCDV IGLLNIYRHD PWDLPGLATI 60 GEREWYFFVP RDRKHGSGGR PNRTTQKGFW KATGSDRKIF SSSHPKNIIG LKKTLVFYNG 120 RAPRGSKTDW VMNEFRLPHT VSSSQDIVLC KIYRKATSLK VLEQRAAIEE EMKTTNQPMD 180 TMSFCSEHNE LIMAASITDQ SPKFLMSVTK DEVEEDIFSI SENNPYEISL EIKGKSNCLS 240 PNFLNGKGNL ADLQVPKLSM DFSQDPVWMQ LRSPWLDNFS LTPSAFVHNF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	3e-47	11	155	17	168	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009605868.1	0.0	PREDICTED: NAC domain-containing protein 35-like
Refseq	XP_016476258.1	0.0	PREDICTED: protein FEZ-like
Swissprot	Q10S65	6e-95	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A1S4AIK2	0.0	A0A1S4AIK2_TOBAC; protein FEZ-like
STRING	XP_009605868.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3531	22	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-99	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]