PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016480744.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 233aa    MW: 26046 Da    PI: 4.8
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016480744.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.9e-174696256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                     y+GVr +  + +Wv+e+r+p+    + kr++lg++ tae+Aa+a++ a+++l+g+
  XP_016480744.1 46 IYRGVRKRN-NDKWVCELREPN----TqKRIWLGSYPTAEMAARAHDVAALALRGH 96
                    69****888.8*********83....25**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.63E-2745105No hitNo description
PfamPF008471.9E-124596IPR001471AP2/ERF domain
SuperFamilySSF541714.58E-2046104IPR016177DNA-binding domain
SMARTSM003801.1E-2646109IPR001471AP2/ERF domain
PROSITE profilePS5103220.82446103IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.5E-2846105IPR001471AP2/ERF domain
PRINTSPR003675.5E-74758IPR001471AP2/ERF domain
PRINTSPR003675.5E-76985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MMNNSISSCS SVIEAEASDE EVILLASNKP KKRAGRKKFK ETRHPIYRGV RKRNNDKWVC  60
ELREPNTQKR IWLGSYPTAE MAARAHDVAA LALRGHLATL NFVDSAWRLQ VPVSKDPKDL  120
RQAAARAAEA FWPGEETNVS YRGATNTDNG DEEMKAATEE NATTNCMQNV VTAENFMYSN  180
SCGEVGMFGT QEWQTNMEEG SLFSPNPCLL GSCFSWDDDV ESDVEVSLWS YSV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009785658.11e-176PREDICTED: dehydration-responsive element-binding protein 1E-like
RefseqXP_016480744.11e-176PREDICTED: dehydration-responsive element-binding protein 1E-like
TrEMBLA0A1S4AVP21e-174A0A1S4AVP2_TOBAC; dehydration-responsive element-binding protein 1E-like
TrEMBLA0A1U7X4711e-174A0A1U7X471_NICSY; dehydration-responsive element-binding protein 1E-like
STRINGXP_009785658.11e-175(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63030.28e-33ERF family protein