PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016482844.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 255aa    MW: 29712.7 Da    PI: 6.6661
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016482844.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.93.8e-23121403128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      G+rFhPt+ el+ ++Lk+ ++g++l+ e   ++ +diy    Pw++  + ++ e+k  yfF++ +k++++ +r +r+ ++g+Wk +    ++++
  XP_016482844.1  12 IGVRFHPTEAELI-NFLKRFLKGEPLPSECPnFQLADIYGDqPPWEIFGASDHpEKKVRYFFTRLKKHKSEHTRVRRTCANGTWKGQIGIDPIKN 105
                     7************.9**********88755559999***87368***744444244566**************************99999***** PP

             NAM  95 kkgelvglkktLvfykgrapkge.ktdWvmheyrl 128
                      kg++vg ++ + f + r+++ge +  W+m+ey++
  XP_016482844.1 106 GKGTVVGFRRCFKFQTSRRKEGEhNKIWLMKEYSV 140
                     9**************998888872556******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-268162IPR003441NAC domain
PROSITE profilePS5100526.38410163IPR003441NAC domain
PfamPF023655.8E-1512140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MSTVPVARRH TIGVRFHPTE AELINFLKRF LKGEPLPSEC PNFQLADIYG DQPPWEIFGA  60
SDHPEKKVRY FFTRLKKHKS EHTRVRRTCA NGTWKGQIGI DPIKNGKGTV VGFRRCFKFQ  120
TSRRKEGEHN KIWLMKEYSV GDDFFRENSI PKEDIIVCRI KKNIRADKNH GVTMEEQDVA  180
KIIEAMLHEP DEDYCTTVQP TPICQAEHQV MDETQKMNEH NNSSYINDCS NYQEQIYWAD  240
DVLLDIDDFG DIICC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16575KKVRYFFTRLK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532600.0EU753260.1 Nicotiana tabacum NAC transcription factor (NAC3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016482844.10.0PREDICTED: NAC domain-containing protein 90-like
TrEMBLA0A1S4B1W90.0A0A1S4B1W9_TOBAC; NAC domain-containing protein 90-like
STRINGXP_009590494.11e-175(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.15e-17NAC domain containing protein 2