PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016489228.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 233aa    MW: 26338.5 Da    PI: 5.5953
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016489228.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.63.5e-1480127455
             AP2   4 kGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +GVr +k +g++ AeIr+ +     + k+++lg+f taeeA + +   ++++eg
  XP_016489228.1  80 SGVRKRK-WGKYCAEIREpF-----NkKKIWLGTFNTAEEASQVYQSKKLEFEG 127
                     8***999.**********55.....34****************99999988887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.90978140IPR001471AP2/ERF domain
PRINTSPR003672.3E-67990IPR001471AP2/ERF domain
PfamPF008475.6E-779126IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-1480129IPR016177DNA-binding domain
CDDcd000183.51E-1781127No hitNo description
Gene3DG3DSA:3.30.730.101.2E-1781128IPR001471AP2/ERF domain
SMARTSM003802.6E-1181146IPR001471AP2/ERF domain
PRINTSPR003672.3E-6101117IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MKSQPKVTGE NNEKQQRKDE QIKIQRKIII KISDPDATES SSSEEEQENR PSRKQQPKLT  60
VHEIFQDKVK TTTFSSKLPS GVRKRKWGKY CAEIREPFNK KKIWLGTFNT AEEASQVYQS  120
KKLEFEGKIK MAKIAKTNKG ISEKSELESK TSDSSNGVEG KGNNSSAGEE QEIGNNSVEE  180
LLKGQWIQIS DDKEVYISLK LGVPIVDNYG FLLGEFSELD DLSISVCDIE NDL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016489228.11e-168PREDICTED: ethylene-responsive transcription factor ERF069-like
TrEMBLA0A1S4BJX71e-166A0A1S4BJX7_TOBAC; ethylene-responsive transcription factor ERF069-like
STRINGXP_009599132.11e-167(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.24e-20ERF family protein