PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016490911.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 230aa    MW: 25719.8 Da    PI: 6.759
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016490911.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2561e-174191155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr++  + +Wv+e+r+ps+   +kr++lg++ tae+Aa+a++ a+++l+g
  XP_016490911.1 41 PVYRGVRRRN-NDKWVCELREPSK---QKRIWLGSYPTAEMAARAHDVAALALRG 91
                    68*****887.8*********964...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.3E-124191IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-2842101IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-2042101IPR016177DNA-binding domain
PROSITE profilePS5103221.6674299IPR001471AP2/ERF domain
SMARTSM003802.5E-2742105IPR001471AP2/ERF domain
PRINTSPR003675.2E-74354IPR001471AP2/ERF domain
CDDcd000188.04E-2843101No hitNo description
PRINTSPR003675.2E-76581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MNNSSTSIRV AVSDEEHINI LALRKPKKRA GRKKFKETRH PVYRGVRRRN NDKWVCELRE  60
PSKQKRIWLG SYPTAEMAAR AHDVAALALR GQLATLNFAD SAWRLQVPAS KDPKDLRQAA  120
AKAAEAFWPG EEADVNSRGA ANTGNGNEEM KVASQEENAA YNCTQNIVTA ENVLYSNSCS  180
EVGMLGTQEW QAYMEERSLL SPNPCCLGSC FSWDDDMESD VEVSLWSYSV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016490911.11e-172PREDICTED: dehydration-responsive element-binding protein 1F-like
TrEMBLA0A1S4BPW81e-170A0A1S4BPW8_TOBAC; dehydration-responsive element-binding protein 1F-like
STRINGXP_009588056.11e-149(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63030.25e-38ERF family protein