PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016496384.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 190aa    MW: 20416.7 Da    PI: 4.4756
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016496384.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-181768155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    + ykG+r +k++g+Wv+eIr+p     r   r++lg+f t+e+Aa a++ a+++l+g
  XP_016496384.1 17 PVYKGIRKRKSSGKWVSEIREP-----RspNRIWLGTFPTPEMAAVAYDVAALALKG 68
                    68*******************9.....4489***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.9E-111768IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-191878IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.4E-281878IPR001471AP2/ERF domain
PROSITE profilePS5103222.4711876IPR001471AP2/ERF domain
SMARTSM003801.7E-311882IPR001471AP2/ERF domain
CDDcd000181.44E-281978No hitNo description
PRINTSPR003672.8E-71930IPR001471AP2/ERF domain
PRINTSPR003672.8E-75878IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MSDPGASSSG GSSGRHPVYK GIRKRKSSGK WVSEIREPRS PNRIWLGTFP TPEMAAVAYD  60
VAALALKGRD AELNFPNSAS SLPVPATNSP HDIQAAAACA AAALGAAGDA LSARRGVDNN  120
NNIIPVSREV ENSTPWNNNE FMDEDLIFDM PNVIMNMAEG MLLSPPRFNL PDDDTTAAEY  180
IADQDLWNYP
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009590884.11e-137PREDICTED: ethylene-responsive transcription factor ERF024
RefseqXP_016496384.11e-137PREDICTED: ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR02e-58ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A1S4C6451e-135A0A1S4C645_TOBAC; ethylene-responsive transcription factor ERF024-like
STRINGXP_009590884.11e-136(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.12e-48ERF family protein