PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016505407.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 105aa    MW: 12316.7 Da    PI: 10.7381
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016505407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like79.83.2e-25148451
         G2-like  4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51
                    +rWt++L +rFv+ave  GG e+AtPk++lelm+vk+Ltl+hvkSHLQ
  XP_016505407.1  1 MRWTSTLYARFVHAVELFGGRERATPKSVLELMDVKDLTLAHVKSHLQ 48
                    79*********************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.84E-11148IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.3E-21148IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-18148IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    Send to blast
MRWTSTLYAR FVHAVELFGG RERATPKSVL ELMDVKDLTL AHVKSHLQGP SIKRPLEFGD  60
ARSGLYLLES HFQPSKKFFL QIMQFLCLLR RKLVIFQFVV MFLFL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016505407.12e-71PREDICTED: myb family transcription factor APL-like
TrEMBLA0A1S4CW025e-70A0A1S4CW02_TOBAC; myb family transcription factor APL-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA122621822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.12e-26G2-like family protein