PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016506326.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 149aa    MW: 17592.9 Da    PI: 4.4841
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016506326.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM83.54.2e-26131392128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkev 92 
                     ppG+rF Ptdeelv++yL++kv+ +++++  +  i+  + y+  P+ L +++  +  ewyfF+++d+  + +  k +    + g W+  gk+ ++
  XP_016506326.1  13 PPGYRFVPTDEELVKYYLENKVHYQPFPALFIedIHAKEFYSKSPEALVENM-CSAGEWYFFIHQDEYFRGKIGKFQivGNEIGLWQCFGKEFPI 106
                     9*************************7774323488889*********8544.3567*******9986654443433123568************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++++g +vg k  L + +   ++++k +W+m+ yrl
  XP_016506326.1 107 YNSEGDVVGFKVNLKYCS---RSAKKNTWIMEKYRL 139
                     ****************94...444589*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-2810142IPR003441NAC domain
PROSITE profilePS5100527.12212149IPR003441NAC domain
PfamPF023651.8E-1713139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MATENDDLIT EFPPGYRFVP TDEELVKYYL ENKVHYQPFP ALFIEDIHAK EFYSKSPEAL  60
VENMCSAGEW YFFIHQDEYF RGKIGKFQIV GNEIGLWQCF GKEFPIYNSE GDVVGFKVNL  120
KYCSRSAKKN TWIMEKYRLS FECAIDDEE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-141213915140Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016506326.11e-108PREDICTED: NAC domain-containing protein 101-like, partial
TrEMBLA0A1S4CYX31e-107A0A1S4CYX3_TOBAC; NAC domain-containing protein 101-like
STRINGPGSC0003DMT4000413101e-58(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1616666
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.16e-22NAC-domain protein 101