PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016507083.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 122aa    MW: 14445.4 Da    PI: 9.7993
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016507083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.33.1e-19121162101
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvkaeek....ewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                     p+G rFhPtd e++ +yL   v++++l+ ++  ++ +d+y   ePw++ + ++++++      yf ++++k+++t kr +r++ +g+Wk +gk +
  XP_016507083.1  12 PMGHRFHPTDREVL-KYLIGFVRDDPLHSQNElMQVADLYADkEPWQIFEVYDQGNNnynnTRYFITPQKKEKPTWKRVSRTVGKGTWKPQGKGR 105
                     89**********99.9**********88766647777*997559****743333222233255******************************** PP

             NAM  91 evlskkgelvg 101
                     ev++ kg+l+g
  XP_016507083.1 106 EVFDDKGRLMG 116
                     ***98887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.1E-177116IPR003441NAC domain
PROSITE profilePS5100518.19211122IPR003441NAC domain
PfamPF023651.3E-712105IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    Send to blast
MEYSQAKCFS RPMGHRFHPT DREVLKYLIG FVRDDPLHSQ NELMQVADLY ADKEPWQIFE  60
VYDQGNNNYN NTRYFITPQK KEKPTWKRVS RTVGKGTWKP QGKGREVFDD KGRLMGAPDI  120
KF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016507083.15e-89PREDICTED: NAC domain-containing protein 101-like
TrEMBLA0A1S4D1871e-87A0A1S4D187_TOBAC; NAC domain-containing protein 101-like
STRINGXP_009762991.12e-79(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.22e-11Arabidopsis NAC domain containing protein 87