PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_016510553.1

Organism

Nicotiana tabacum

Taxonomic ID

4097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

BES1

Protein Properties

Length: 204aa MW: 21037.1 Da PI: 9.2746

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_016510553.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	100	4.8e-31	2	86	18	96
DUF822 18 RERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.....eeaeaagssasaspesslq.s 96 RER+RRai++ki+ GLR++G+y+l r+D+n+Vl+ L+ eAGw+v++DGttyr +s+ + + ++g+s+ a+p+ss+ + XP_016510553.1 2 RERQRRAITTKIFNGLRKHGGYRLSPRSDINQVLRHLASEAGWIVDPDGTTYRSSSSSTnnnscPHCGVGGKSNAATPTSSTVgH 86 9****************************************************88777755443444567788888888887632 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	6.1E-28	2	142	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence Send to blast
MRERQRRAIT TKIFNGLRKH GGYRLSPRSD INQVLRHLAS EAGWIVDPDG TTYRSSSSST 60 NNNSCPHCGV GGKSNAATPT SSTVGHTSGG GGECSTTASP LRATANCGDT KTTYSRTPAT 120 NLFDSGFSLS GAVSTSALLS STSSDTLFSI YMSGACGGAG VGGISGVYHP SSAASATVRH 180 QEQPSYLLQE VRASNQNTPV GSPL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016510533.1	1e-147	PREDICTED: beta-amylase 7-like isoform X1
Refseq	XP_016510539.1	1e-147	PREDICTED: beta-amylase 7-like isoform X1
TrEMBL	A0A1S4DAZ8	1e-146	A0A1S4DAZ8_TOBAC; beta-amylase 7-like isoform X1
STRING	XP_009783609.1	1e-146	(Nicotiana sylvestris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	8e-17	beta-amylase 7