PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016512625.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 134aa    MW: 15672.2 Da    PI: 8.7591
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016512625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.12.6e-17511914128
             NAM  14 lvveyLkkkvegkkleleevikevdiykvePwdL.pkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgk.dkevlskkgelvglkkt 105
                     l+ + L++k ++++l++ + +  ++i+++ P+d+ p+++++ + ke+y  ++r++ y     + r +++gyWk     + ++l   + +vg+k+ 
  XP_016512625.1   5 LI-QQLNNKFKNQPLSI-DRLIFANINDFSPQDFfPEEINGgGMKECYVLTPRRRLYGIMPCPDRRARNGYWKLLKCiNDNILG-PDGAVGMKQK 96 
                     44.569999999**999.5677789********9556666636679************999999999******65542777777.7778****** PP

             NAM 106 LvfykgrapkgektdWvmheyrl 128
                     L f++g+ ++g kt+W+m ey+l
  XP_016512625.1  97 LLFFEGKPNHGCKTQWCMIEYKL 119
                     *********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.8421134IPR003441NAC domain
PfamPF023652.9E-78119IPR003441NAC domain
SuperFamilySSF1019412.09E-169122IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MDRFLIQQLN NKFKNQPLSI DRLIFANIND FSPQDFFPEE INGGGMKECY VLTPRRRLYG  60
IMPCPDRRAR NGYWKLLKCI NDNILGPDGA VGMKQKLLFF EGKPNHGCKT QWCMIEYKLR  120
QHCCSIDCDH NIGR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016512625.11e-96PREDICTED: NAC domain-containing protein 71-like, partial
TrEMBLA0A1S4DGY13e-95A0A1S4DGY1_TOBAC; NAC domain-containing protein 71-like
STRINGXP_009589729.15e-85(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1770934
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.27e-16NAC family protein