PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016650869.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 194aa    MW: 21417.1 Da    PI: 4.2493
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016650869.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.65.5e-08158178525
                     CHHHCHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKk 25 
                     + e+rkq+NRe+A+rsR+R++
  XP_016650869.1 158 RIEKRKQSNRESAKRSRLRRQ 178
                     569****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-4151178No hitNo description
CDDcd147024.88E-8160178No hitNo description
PROSITE patternPS000360161176IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MGTRESSEPS TQGAPFEIQK KEETFFDEYT ESLTIYKEGS VGTEFVGNAL AESEKKISFS  60
GNNGDGASQS AASRGEDSSD ESGDVNRDFS ATQNQMLDLM HQDGDAENNS TDQYGGTNTD  120
LAFQDFGVNV PETHLDLGMG LNVSSSQAIR TKEDYEQRIE KRKQSNRESA KRSRLRRQVT  180
YLCSLSDDNM CVCV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016650869.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016650869.11e-142PREDICTED: G-box-binding factor 1-like
TrEMBLA0A314UAY71e-119A0A314UAY7_PRUYE; G-box-binding factor 1-like isoform X2
STRINGXP_008236812.11e-126(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1575779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.23e-09G-box binding factor 1