PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016650945.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 323aa    MW: 35575.1 Da    PI: 6.9738
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016650945.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.28.4e-14234293462
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklkse 62 
                      +r+rr++kNRe+A rsR+RK+a++ eLe  +  Le+eN++L k+++e+ ++  ++l  +
  XP_016650945.1 234 QQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENEQLlKEKAERTEERRKQLMEK 293
                     58**************************************98245577777777766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-9231295IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.76233285IPR004827Basic-leucine zipper domain
PfamPF001704.4E-12234291IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-9235286No hitNo description
CDDcd147072.46E-17235281No hitNo description
Gene3DG3DSA:1.20.5.1703.2E-11236287No hitNo description
PROSITE patternPS000360238253IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MASSKLVSSS SRSRNSDLSQ RPSSNSPATK PKPSATPSSS SAHPQTLNNH SNGISDYHST  60
NTTSSMPIGS MTIDGLLYDP NPTPMTDATL LDAQITLINT ASAAEMSTSS AAVPQKTVDE  120
VWREIVSGEA RKGCKEEVPD DLMTLEDFLA RAGAVEEDDI KDMPLAMPPP ETERLSGGVF  180
SFDPMPQLSP FSSIDKVEGS IIGFGNGVEM VGSGGVGRGK RGRAVLEPMD KVAQQRQRRM  240
IKNRESAARS RERKQAYQVE LESLAVRLEE ENEQLLKEKA ERTEERRKQL MEKVIPVVEK  300
RRPARALRRV HSLQWSLMQL VWQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016650945.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2535380.0AC253538.1 Prunus persica cultivar Lovell clone JGIBIXB-13C4, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016650945.10.0PREDICTED: G-box-binding factor 4-like isoform X1
TrEMBLA0A251MS420.0A0A251MS42_PRUPE; Uncharacterized protein
STRINGXP_008237569.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.12e-48bZIP family protein