PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016651384.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 182aa    MW: 20904.4 Da    PI: 7.0236
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016651384.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.91e-32161511128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevd...iykvePwdLpkkvkaeekewyfFskrdkkya....tgkrknratk..sgyWkat 86 
                     lp+GfrF Ptd+elv++yL +kv +++++++e+i+++d    y+++P++L  +++ +e+ew+fF+++d ++     +g+++ r++    g+Wk  
  XP_016651384.1  16 LPVGFRFMPTDKELVTHYLMNKVFDRPVPAAEAIQDIDatqFYSTHPKNLV-TFSCGEREWFFFIHEDDENCsasaQGRKNIRVVGngVGFWKPN 109
                     79*************************998888888764448999*****6.777899*******99998872332344444544434789**** PP

             NAM  87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     g+++++++++g++   k  L++++g+ +k++kt+W m ey+l
  XP_016651384.1 110 GSENPIHNEDGNVYASKIFLTYFSGSLRKAKKTHWKMVEYHL 151
                     *****************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.49E-3310174IPR003441NAC domain
PROSITE profilePS5100533.08216176IPR003441NAC domain
PfamPF023656.8E-1817151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MEAEHGQGAM MSSGQLPVGF RFMPTDKELV THYLMNKVFD RPVPAAEAIQ DIDATQFYST  60
HPKNLVTFSC GEREWFFFIH EDDENCSASA QGRKNIRVVG NGVGFWKPNG SENPIHNEDG  120
NVYASKIFLT YFSGSLRKAK KTHWKMVEYH LHSDSHTEEE YQVQRREWVL GRLKRGNAYN  180
GL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-161617315165Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016651384.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016651384.11e-137PREDICTED: NAC transcription factor 29-like
TrEMBLA0A314YR111e-132A0A314YR11_PRUYE; NAC transcription factor 29-like
STRINGXP_004301123.11e-76(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144391218
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.11e-22NAC domain containing protein 32