PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016651997.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 156aa    MW: 17640.9 Da    PI: 4.98
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016651997.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.82.3e-133088563
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                    ++ +r+ +NRe+ArrsR RK++ +  L+  +  L++eN++ +  ++  ++++ +l++e+
  XP_016651997.1 30 RKRKRMLSNRESARRSRMRKQEHLTDLTAQIGLLKKENHQIITSMNVTNQLYMNLEAEN 88
                    67899****************************************99999999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.1E-1025109No hitNo description
SMARTSM003382.4E-152690IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.0252891IPR004827Basic-leucine zipper domain
PfamPF001702.0E-103087IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.82E-123084No hitNo description
CDDcd147023.20E-163182No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MGSSSGVSSG SSMLQNSGSD EDLHQVMDQR KRKRMLSNRE SARRSRMRKQ EHLTDLTAQI  60
GLLKKENHQI ITSMNVTNQL YMNLEAENSV LRAQMDELSN RLQSLNDIID CINSSKWLLE  120
AEEEDTQIIG GDGFLNPWST LCLNQPIMAS ADMFMC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14249RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016651997.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016651997.11e-111PREDICTED: bZIP transcription factor 53
SwissprotC0Z2L54e-46BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A251NCA91e-109A0A251NCA9_PRUPE; Uncharacterized protein
STRINGXP_008241732.11e-111(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.11e-44basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]