PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016652022.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 232aa    MW: 25400 Da    PI: 9.9423
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016652022.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1331.3e-10167207545
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  XP_016652022.1 167 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 207
                     788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.1E-8159210No hitNo description
SMARTSM003388.2E-10163226IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415165209IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.5E-7167210No hitNo description
CDDcd147081.12E-21167219No hitNo description
PfamPF001702.9E-7167207IPR004827Basic-leucine zipper domain
PROSITE patternPS000360170185IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MGSRTVKTGA NDGNKVVTEM PSFVPPVPTS NPTGTEGSTI RSSRISDFGT LEQTLGFRIE  60
DAVDIGRSPV FNQNKLSSQA LGSSDAQFGS LNKLLPLQKE AQQNLPSVSR SNHENWGESS  120
MADGSPRTDT STDDTEDKNQ RTELNQMTGL LVSDSSDRSK DKPGDQKTLR RLAQNREAAR  180
KSRLRKKAYV QQLESSRLKL TQLEQELQRA RQQGIFISSS GDQSHSMSGN GI
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016652022.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016652020.11e-168PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like
RefseqXP_016652021.11e-168PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like
RefseqXP_016652022.11e-168PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like
SwissprotO241601e-70TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A251N6D91e-162A0A251N6D9_PRUPE; Uncharacterized protein
STRINGXP_008243383.11e-166(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-28TGACG motif-binding factor 6