PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016652241.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 324aa    MW: 35729.1 Da    PI: 5.6623
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016652241.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM951.2e-29181381128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     l pG++F+Ptd+el+++yLkkk++g++ e++++i+e+++ ++eP+dLp          +fFs+ +  +++g+   r+t++g+ k+tgk +e+ ++
  XP_016652241.1  18 LLPGIKFSPTDKELLSFYLKKKIAGEDSEFSNIIPEINLREHEPRDLP--------TEFFFSEPNYMSPNGDSCYRTTNEGFYKSTGKPREIEDE 104
                     579***************************999**************9........359**********************************99 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++++g k+ + fy+grap+ + t+ v+h+++l
  XP_016652241.1 105 lSKAVIGEKRYMPFYEGRAPNHKLTKYVLHQFSL 138
                     88899***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-3115160IPR003441NAC domain
PROSITE profilePS5100531.85818160IPR003441NAC domain
PfamPF023652.3E-1320138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MGGGGGTTDE RVSVPMGLLP GIKFSPTDKE LLSFYLKKKI AGEDSEFSNI IPEINLREHE  60
PRDLPTEFFF SEPNYMSPNG DSCYRTTNEG FYKSTGKPRE IEDELSKAVI GEKRYMPFYE  120
GRAPNHKLTK YVLHQFSLTK TELAKLAPNR EFVLNHLTIK KGSTRACNPK PNCKKRKYDS  180
NCDKLAEHGI PGYIASNYKD DQAAAAANMI PEPEEHLADE DVLLGSENRN ECAESESANG  240
SRLINNNDSS TLAVGSPGGC FLSGYGNVAA YDPFREVSFQ PEGNLISPLH PSSLRDIPLR  300
SPVHTGLPGD FMCANNSILI GMQL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A9e-161613815142NO APICAL MERISTEM PROTEIN
1ut4_B9e-161613815142NO APICAL MERISTEM PROTEIN
1ut7_A9e-161613815142NO APICAL MERISTEM PROTEIN
1ut7_B9e-161613815142NO APICAL MERISTEM PROTEIN
4dul_A9e-161613815142NAC domain-containing protein 19
4dul_B9e-161613815142NAC domain-containing protein 19
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168176PKPNCKKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016652241.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016652241.10.0PREDICTED: NAC domain-containing protein 89-like
TrEMBLA0A251QIK60.0A0A251QIK6_PRUPE; Uncharacterized protein
STRINGXP_008244186.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3993222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.11e-26NAC domain containing protein 57