PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016652242.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 379aa    MW: 41918 Da    PI: 4.6079
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016652242.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.87.6e-1898455128
             NAM  55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + w+ Fs++++kya++ r nr t++g+Wk tgk +e++s+  +++++  k+tL+f+ gr +k +kt Wv +ey l
  XP_016652242.1   9 PRMWFSFSRHHHKYANSPRCNRLTEKGFWKITGKPREIKSRqlSESVTCKKRTLTFHLGRPSKQSKTGWVKQEYYL 84 
                     4689************************************976666677789**********************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.5931104IPR003441NAC domain
SuperFamilySSF1019414.97E-198104IPR003441NAC domain
PfamPF023652.5E-6983IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MLPDSPYQPR MWFSFSRHHH KYANSPRCNR LTEKGFWKIT GKPREIKSRQ LSESVTCKKR  60
TLTFHLGRPS KQSKTGWVKQ EYYLTSTAPG SNLSGLVLFR MKNKSADYKS DNKQQQDVAI  120
YDESADPAIG GDVASNSQDD QAAANHKILE AEAEQHLLGS GNHNDGEPGG FVSSDFDIMQ  180
ELCAQLGLEP PQLGNVPGTG DYLASNSDNQ AAAIHPMTTE EEELLAFKEL ERVLLGSGNP  240
DNGEPRSCVS SDMRQESCAQ PGEDLDSPVP PPGPPELGNA PDVYNDSSLP NKNNIPNNYD  300
SKPISNTASD FENQAKDERI PEVYSQSEEN LQLFFRSLEV ENYTLPSSIL YVEQGDVLHA  360
NNYIGCNESQ YAALFPHSS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016652242.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008244236.10.0PREDICTED: NAC domain-containing protein 59-like isoform X1
RefseqXP_016652242.10.0PREDICTED: NAC domain-containing protein 59-like isoform X2
TrEMBLA0A251QIM10.0A0A251QIM1_PRUPE; Uncharacterized protein
STRINGXP_008244236.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.14e-15NAC domain containing protein 2