PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00002.1.g07890.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 315aa    MW: 34010.3 Da    PI: 9.0841
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00002.1.g07890.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.21.2e-10242344
                                  SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
               Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                                  +W+t E e++ +a + +G++ W+++a+ +g g+t  +++ ++
  Zjn_sc00002.1.g07890.1.am.mk  2 SWSTSENERFERALATYGSD-WERVAAAVGGGKTVDDVRRHY 42
                                  7*******************.********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129314.358150IPR017884SANT domain
SMARTSM007177.5E-5248IPR001005SANT/Myb domain
CDDcd001677.01E-6242No hitNo description
PfamPF002497.2E-9242IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.0E-5243IPR009057Homeodomain-like
SuperFamilySSF466891.01E-10250IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MSWSTSENER FERALATYGS DWERVAAAVG GGKTVDDVRR HYALLVKDVG EIESGDYGYP  60
NSSAGNGNRN NRYAHVHAPL CLAICSDDQA PEFHVLFVYA CMFQVLAEAK PTGRKLDGKP  120
SEHVWVACSL GVRPRPPGGH RSLVHSSSPQ DKAMVASLYV GGTWRCFSSS ATVASRWLQQ  180
AYRVYVPVSR GAQPASQRRP PPEGEPTPQN SSSPVAGWAS VVFSTRPALY YSRIGASLVT  240
ASNPSPSPFP PANRACRDPF VKPSRRISAR PPFAGCSTHR FCSGGGGDPS GPWIAFFTFA  300
GKEALAALLF CEIFP
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2794934
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.11e-14RAD-like 1