PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00004.1.g01090.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 213aa    MW: 23436 Da    PI: 5.5984
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00004.1.g01090.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.3e-192372255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  +ykGVr++k +grWvAeIr p++   r r++lg+++t+e+Aa+a +aa  +l+g
  Zjn_sc00004.1.g01090.1.sm.mk 23 RYKGVRRRK-WGRWVAEIRLPNS---RDRIWLGSYDTPEKAARAFDAAFVCLRG 72
                                  7*****998.**********933...5*********************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.62E-192383IPR016177DNA-binding domain
CDDcd000183.29E-262384No hitNo description
SMARTSM003804.6E-302388IPR001471AP2/ERF domain
PROSITE profilePS5103222.7082382IPR001471AP2/ERF domain
PfamPF008473.9E-122371IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-272383IPR001471AP2/ERF domain
PRINTSPR003673.5E-92435IPR001471AP2/ERF domain
PRINTSPR003673.5E-94662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MLTSPQEQEH QHARLPSSGD VRRYKGVRRR KWGRWVAEIR LPNSRDRIWL GSYDTPEKAA  60
RAFDAAFVCL RGPGAADGLN FPSSPPAVAR TSDVDEVYAV AVSYGNNHDT AMVAREEAAV  120
DPPPPRDSML PADNNVAAAA VPPRQLQVST ERLDCWSEFV NNPPPLYSPT WTGSHEHLLP  180
VPVTADVHTD ETESGAFLSL WSFDSSGGSC SWR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12430KGVRRRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004966651.15e-64ethylene-responsive transcription factor ERF017
TrEMBLK3Y3021e-62K3Y302_SETIT; Uncharacterized protein
STRINGSi008587m2e-63(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.11e-32ERF family protein