PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00004.1.g12740.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 183aa    MW: 20046.5 Da    PI: 4.927
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00004.1.g12740.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like38.72.2e-123661126
                         G2-like  1 kprlrWtpeLHerFveaveqLGGsek 26
                                    k+r+rWt++LHerFv+ v+qLGG+++
  Zjn_sc00004.1.g12740.1.sm.mkhc 36 KTRIRWTQDLHERFVDSVNQLGGADR 61
                                    68*********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.7E-103566IPR009057Homeodomain-like
PfamPF143792.0E-1982127IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MQIPGENALS MSCTMGAPAT HTSKVITLPG QGAPSKTRIR WTQDLHERFV DSVNQLGGAD  60
RKHEKRAAGN DVLNLDPNTG EQITEALRVQ LDVQRRLHEQ LAMQRNLQLK IEEQGKRLQK  120
MFEEQLKASK SVLEPREQLQ GAGAALDEVI GVGDEEDDAC DDVQLLSVAS SCCNDAGFPS  180
KIS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025822779.12e-79probable transcription factor KAN2
RefseqXP_025822780.12e-79probable transcription factor KAN2
SwissprotQ0WVU37e-31PHL5_ARATH; Myb family transcription factor PHL5
TrEMBLA0A0A9GJK14e-81A0A0A9GJK1_ARUDO; Uncharacterized protein
STRINGSi022099m4e-78(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69333751
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.16e-33G2-like family protein