PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00006.1.g06150.1.sm.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 166aa MW: 18543.6 Da PI: 4.8755

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00006.1.g06150.1.sm.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	26.1	1.9e-08	4	34	25	55
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk+i lm+v+++ ++++ HLQk+R Zjn_sc00006.1.g06150.1.sm.mk 4 TTATPKKIELLMNVNSIDRKQISAHLQKHRK 34 57***************************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.1E-6	5	36	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence Send to blast
MIPTTATPKK IELLMNVNSI DRKQISAHLQ KHRKRMDKEL KDSMLLKKAG KNSSSSRRLR 60 KSCEEAVSEN NDIQPEDRTV TENIIRETKG RKVYEAMRKA LQHGTVFDEQ LSDDPSAEEA 120 EQGEAYMMED SIAQDDAAGA KEVSNNADSD EGGPVKLVTY SDSEDA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	K3YEV5	3e-32	K3YEV5_SETIT; Uncharacterized protein
STRING	Si012772m	5e-33	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5920	23	45