PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00007.1.g01100.1.sm.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 161aa MW: 17613.1 Da PI: 9.441

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00007.1.g01100.1.sm.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	23.1	1.6e-07	120	139	26	45
G2-like 26 kAtPktilelmkvkgLtleh 45 kAtPk+i ++mkvkgLt++h Zjn_sc00007.1.g01100.1.sm.mkhc 120 KATPKAIQRVMKVKGLTIYH 139 8******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF11107	8.3E-14	11	103	No hit	No description
Gene3D	G3DSA:1.10.10.60	1.7E-5	119	140	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence Send to blast
MGWAHATVAL EELLGLVRGF VDILVLAGGR TSSGAAATWS CGEVKNALRW ALFFEEVFKN 60 LRDSGQYEDS ASELDAALVE LTSSQDFPKG LAGMRSDTLS SARDIDARKF NTSKLFLLPK 120 ATPKAIQRVM KVKGLTIYHK YRAIQYRPES SDDPKKAAVA S

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004954343.1	3e-53	uncharacterized protein LOC101763564 isoform X1
Refseq	XP_004954345.1	9e-54	uncharacterized protein LOC101763564 isoform X3
Refseq	XP_022682901.1	2e-53	uncharacterized protein LOC101763564 isoform X2
TrEMBL	A0A1E5V019	2e-54	A0A1E5V019_9POAL; Uncharacterized protein
STRING	Pavir.Ab03274.1.p	4e-53	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5494	25	26

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	4e-08	phosphate starvation response 1