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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zjn_sc00007.1.g04730.1.sm.mk |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
bHLH |
| Protein Properties |
Length: 89aa MW: 9905.14 Da PI: 9.335 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00007.1.g04730.1.sm.mk | genome | ZGD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 25 | 3.5e-08 | 15 | 55 | 15 | 54 |
HHHHHHHHHHCTSCCC....TTS-STCHHHHHHHHHHHHHH CS
HLH 15 riNsafeeLrellPkas.kapskKlsKaeiLekAveYIksL 54
+iN+ +++L+ llP +s + +s+ s L++++ YIksL
Zjn_sc00007.1.g04730.1.sm.mk 15 EINELISKLQALLPASSrRRGSGQASTTKLLKETCSYIKSL 55
7**************555999999****************9 PP
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| Functional Description ? help
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| Source |
Description |
| UniProt | Atypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of grain size. Binds the transcription repressor APG and forms a heterodimer of antagonistic basic helix-loop-helix transcription factors that regulates grain length and weight by controlling cell elongation in lemma and palea (By similarity). {ECO:0000250}. |
| UniProt | Atypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of grain size. Binds the transcription repressor APG and forms a heterodimer of antagonistic basic helix-loop-helix transcription factors that regulates grain length and weight by controlling cell elongation in lemma and palea. {ECO:0000269|PubMed:23136524}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU975859 | 1e-109 | EU975859.1 Zea mays clone 503296 DNA binding protein mRNA, complete cds. |
