PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00008.1.g04120.1.sm.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 257aa MW: 27225.8 Da PI: 10.818

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00008.1.g04120.1.sm.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.7	1.1e-07	169	211	21	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R RKk+++ e ++ + +L+ eN+aL++e++ l+k + +l +e+ Zjn_sc00008.1.g04120.1.sm.mkhc 169 RPRKKMRLPEIQQMMRSLSVENDALRQEMKALQKACTALSKEN 211 89*************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.7E-5	169	207	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence Send to blast
MTAAVDVEPC ALVATAADII CSFRAADLAG WTPPWRKRPD PPARDDDAAD AREQLVAWPG 60 VARGKRSRSR SRRGSSPSAS AGSGSAGARK TKKKEARRAR GSPPSPLDYS AGSGASTSGG 120 EDGAFCSPPP PVLSSMGGVL QVDPVNSKVG LAGRRSIPPV PPPRPTGQRP RKKMRLPEIQ 180 QMMRSLSVEN DALRQEMKAL QKACTALSKE NGKLETRLHQ LNKREEKKGK LQAGQGATEE 240 AQNGFALPDL NLPAHDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	64	69	KRSRSR
2	168	174	RPRKKMR
3	222	229	KREEKKGK

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT054292	7e-56	BT054292.1 Zea mays full-length cDNA clone ZM_BFb0217J09 mRNA, complete cds.
GenBank	KJ728326	7e-56	KJ728326.1 Zea mays clone pUT6607 bZIP transcription factor (bZIP93) mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025811831.1	5e-78	collagen alpha-1(I) chain-like
TrEMBL	A0A3L6PC00	3e-78	A0A3L6PC00_PANMI; Uncharacterized protein
STRING	GRMZM2G050912_P01	3e-61	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3790	29	51