PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00008.1.g09380.1.sm.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

EIL

Protein Properties

Length: 170aa MW: 19458.5 Da PI: 8.4392

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00008.1.g09380.1.sm.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	173.1	2.9e-53	38	148	1	112
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipe 79 eel krmwkd+++l+r+ker+++l ++a+++++k + ++qa rkkmsr DgiL+YMlk+mevcna+GfvYgiip+ Zjn_sc00008.1.g09380.1.sm.mkhc 38 EELAKRMWKDRVRLRRIKERQQRLA-LQKADLEKAKLKPVSDQAMRKKMSRVHDGILRYMLKMMEVCNARGFVYGIIPD 115 8*******************976.55556******************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 80 kgkpvegasdsLraWWkekvefdrngpaaisky 112 kgkpv+gasd++raWWkekv+fd+ngpaai+k+ Zjn_sc00008.1.g09380.1.sm.mkhc 116 KGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKR 148 *****************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04873	2.5E-52	38	148	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence Send to blast
MEQLAMIASE LGDSSDLELE GIQNLNENDV SDEEIEPEEL AKRMWKDRVR LRRIKERQQR 60 LALQKADLEK AKLKPVSDQA MRKKMSRVHD GILRYMLKMM EVCNARGFVY GIIPDKGKPV 120 SGASDNIRAW WKEKVKFDKN GPAAIAKRLA VLVDPYELLE VFPGDMSSNV

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269\|PubMed:9215635, ECO:0000269\|PubMed:9851977}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002462568.1	7e-87	ETHYLENE INSENSITIVE 3-like 3 protein
Refseq	XP_021308896.1	7e-87	ETHYLENE INSENSITIVE 3-like 3 protein
Refseq	XP_021308897.1	7e-87	ETHYLENE INSENSITIVE 3-like 3 protein
Swissprot	O23116	4e-54	EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBL	C5X3X3	2e-85	C5X3X3_SORBI; Uncharacterized protein
STRING	Sb02g028390.1	3e-86	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3720	37	79

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73730.1	2e-56	ETHYLENE-INSENSITIVE3-like 3

Publications ? help Back to Top
Frerigmann H,Gigolashvili T Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency. Front Plant Sci, 2014. 5: p. 626 [PMID:25426131] Zheng ZL,Zhang B,Leustek T Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing. Front Plant Sci, 2014. 5: p. 710 [PMID:25566284] Panda SK,Sunkar R Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling. Plant Signal Behav, 2015. 10(4): p. e1010916 [PMID:25912823] Wawrzyńska A,Sirko A EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor. Plant Sci., 2016. 253: p. 50-57 [PMID:27968996]