PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00009.1.g08290.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 399aa MW: 44271.9 Da PI: 7.9401

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00009.1.g08290.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	64.7	1.5e-20	121	182	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE...-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkver...saedpkvveitYegeHnhe 59 +Dgy+WrKYGqK++++ f+r YY+C +Cp+kkkv++ s++d ++e+tY ++H+++ Zjn_sc00009.1.g08290.1.am.mk 121 KDGYQWRKYGQKNIQNCSFARYYYKCNGDrRCPAKKKVQQqdgSSDDAPMFEVTYVNDHTCH 182 7***********************9988****9833356899**********96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	6.4E-23	105	183	IPR003657	WRKY domain
PROSITE profile	PS50811	15.032	115	179	IPR003657	WRKY domain
SuperFamily	SSF118290	1.57E-19	117	182	IPR003657	WRKY domain
SMART	SM00774	1.6E-25	120	183	IPR003657	WRKY domain
Pfam	PF03106	1.3E-21	121	182	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence Send to blast
MAFDPVTKLS DVLTGGYHLN SRLQALLGSP LDFRRQEEAK AFSQELSRVF MVSLSMLKQT 60 YDSKRNLNDM APVIRTGDSF GFCTLAKERV TISREGVTSH KNSTREQEFT RKEITSTPHS 120 KDGYQWRKYG QKNIQNCSFA RYYYKCNGDR RCPAKKKVQQ QDGSSDDAPM FEVTYVNDHT 180 CHHVDDGSSQ KSLPQTTTTG QQRSGFEAAA NRNSVALFDP LHRVGSAEEN EAIVSCLATV 240 ISGTAPSSPG AEPVAPPVYL PQSIAGASMV ADGAMAMLEL DTGFSWDHPS SPLCPAEVIM 300 GFRDDVHMVD AARFGDTTGR PGRWLIKDES VTEARASVRP CCLVPTPAGR HIPGPRVFET 360 MTRTITRADE CLRRNGLERV NHSIPLVRKW SESTILFFH

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence Send to blast

MAFDPVTKLS DVLTGGYHLN SRLQALLGSP LDFRRQEEAK AFSQELSRVF MVSLSMLKQT  60
YDSKRNLNDM APVIRTGDSF GFCTLAKERV TISREGVTSH KNSTREQEFT RKEITSTPHS  120
KDGYQWRKYG QKNIQNCSFA RYYYKCNGDR RCPAKKKVQQ QDGSSDDAPM FEVTYVNDHT  180
CHHVDDGSSQ KSLPQTTTTG QQRSGFEAAA NRNSVALFDP LHRVGSAEEN EAIVSCLATV  240
ISGTAPSSPG AEPVAPPVYL PQSIAGASMV ADGAMAMLEL DTGFSWDHPS SPLCPAEVIM  300
GFRDDVHMVD AARFGDTTGR PGRWLIKDES VTEARASVRP CCLVPTPAGR HIPGPRVFET  360
MTRTITRADE CLRRNGLERV NHSIPLVRKW SESTILFFH

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004972234.1	3e-83	WRKY transcription factor WRKY62
TrEMBL	A0A3L6SIS7	1e-86	A0A3L6SIS7_PANMI; Uncharacterized protein
STRING	Si003782m	1e-82	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13243	26	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66560.1	2e-13	WRKY DNA-binding protein 64