PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00009.1.g08310.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 326aa    MW: 36282.9 Da    PI: 9.7667
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00009.1.g08310.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY28.52.9e-091632032258
                                   EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS CS
                          WRKY  22 rsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnh 58 
                                   + YYrCt++   +Cp++k+ve++ ++dp ++ ++Y++eH++
  Zjn_sc00009.1.g08310.1.am.mk 163 KFYYRCTYHqdhSCPATKHVEQTnSQDPPLFRVIYTNEHTC 203
                                   67******98999*******975268*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007741.8E-7152205IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.1E-8160203IPR003657WRKY domain
SuperFamilySSF1182902.22E-8160203IPR003657WRKY domain
PfamPF031069.3E-11160203IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MTTPSRIERR QRPTKIPAKS SPLRKARRWE TATGATPRRP LGPVRWRSCK ATDGGAAGPG  60
SGVYTAPSFA IDRRDLRQAE LTVGGWGFKV FRHKRHAKKR TSNHLEEQRI ALQVPTTFFI  120
PYARLVAMAK RDDYKTSSSG CSHGTHKRLL QDISGYAQEH AKKFYYRCTY HQDHSCPATK  180
HVEQTNSQDP PLFRVIYTNE HTCICGDPSS IHIQQMADAS LRKAEIELFP SLAPCNAGHE  240
MIKEEEGAIV SSLLGVINGG HDVATSESLR RDMQENTAAL SSSKYSNLSS KVDTRSSHEA  300
NPSISPVLLP ASEEPRMNLV EPLESH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002456546.13e-65probable WRKY transcription factor 32
RefseqXP_021311159.13e-65probable WRKY transcription factor 32
RefseqXP_021311160.13e-65probable WRKY transcription factor 32
RefseqXP_021311161.13e-65probable WRKY transcription factor 32
RefseqXP_021311162.13e-65probable WRKY transcription factor 32
TrEMBLA0A1E5V3T97e-65A0A1E5V3T9_9POAL; Uncharacterized protein
STRINGSb03g038170.11e-64(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118143139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.15e-08WRKY DNA-binding protein 38