PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00009.1.g11790.1.sm.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

VOZ

Protein Properties

Length: 228aa MW: 26347.2 Da PI: 5.7862

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00009.1.g11790.1.sm.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	246.3	5.4e-76	21	146	92	217
VOZ 92 aaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhly 170 elfdl ++ege+irewlffdkprraf+sgnrkqrslpdy grgwhesrkqvmk+fgglkrsyymdpqpsss+ewhly Zjn_sc00009.1.g11790.1.sm.mkhc 21 DQELFDLYIFEGESIREWLFFDKPRRAFDSGNRKQRSLPDYGGRGWHESRKQVMKDFGGLKRSYYMDPQPSSSYEWHLY 99 479************************************************************************** PP VOZ 171 eyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 eyein++da+alyrle+k++d+kksak+k++++sl+++q++++rl+a Zjn_sc00009.1.g11790.1.sm.mkhc 100 EYEINDCDAFALYRLEFKSSDAKKSAKSKLACNSLNEIQQQMVRLSA 146 *******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence Send to blast
MAQGFEFCPE YQTLPWTGEG DQELFDLYIF EGESIREWLF FDKPRRAFDS GNRKQRSLPD 60 YGGRGWHESR KQVMKDFGGL KRSYYMDPQP SSSYEWHLYE YEINDCDAFA LYRLEFKSSD 120 AKKSAKSKLA CNSLNEIQQQ MVRLSADGPV NAKRPSRSRI KSNPKDVNAN IYSVPNSTTQ 180 VNVPNAYQAV PQVDQMQFLN GDVVYGPHLP YGYSTERSDF YWNSNDGA

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002458501.2	1e-132	transcription factor VOZ1
Swissprot	Q9SGQ0	1e-61	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1E5VWW5	1e-132	A0A1E5VWW5_9POAL; Transcription factor VOZ1
STRING	Sb03g034810.1	1e-131	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	4e-58	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]