PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00012.1.g01080.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 169aa    MW: 18728 Da    PI: 10.3857
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00012.1.g01080.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.49.3e-11106128123
                                   ---SS-EEEEEEE--TT-SS-EE CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                                   ldDg++WrKYGqK++ g+++prs
  Zjn_sc00012.1.g01080.1.am.mk 106 LDDGFSWRKYGQKDILGAKYPRS 128
                                   59********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.1E-1693168IPR003657WRKY domain
SuperFamilySSF1182901.83E-11100168IPR003657WRKY domain
PROSITE profilePS5081114.16101169IPR003657WRKY domain
SMARTSM007743.3E-16106169IPR003657WRKY domain
PfamPF031061.1E-7107129IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MESVGGDGGG RFTLESELAQ VQNILRELEA NRNQQDLPPA AREICGELAS RVERSLRIAR  60
SWVPPGSADG STGGSAAKDA QFKRRKGMPC VRSQVRVASL HDTAALDDGF SWRKYGQKDI  120
LGAKYPRSAL DHQRPHVTNH SQTLRHTAYF RCTHRTTQSC LATKQVQRT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025806380.11e-52probable WRKY transcription factor 30
TrEMBLA0A2S3H9K02e-51A0A2S3H9K0_9POAL; Uncharacterized protein
TrEMBLA0A2T7EA473e-51A0A2T7EA47_9POAL; Uncharacterized protein
STRINGPavir.J01329.1.p8e-52(Panicum virgatum)
STRINGPavir.J03334.1.p6e-52(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33553183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.14e-19WRKY DNA-binding protein 30