PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00013.1.g00270.1.sm.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 144aa MW: 15492 Da PI: 11.4074

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00013.1.g00270.1.sm.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.1	1.8e-08	43	78	5	40
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 +r rr+ +NRe+Arr+R+RK+ ++ eL+ ++ Le+ Zjn_sc00013.1.g00270.1.sm.mk 43 RRLRRRVSNRESARRCRARKQLRLHELRCMAARLEG 78 799************************999999886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.1E-8	36	115	No hit	No description
SMART	SM00338	0.003	39	107	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	9.1E-5	41	69	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.013	41	77	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.73E-5	43	79	No hit	No description
PROSITE pattern	PS00036	0	46	61	IPR004827	Basic-leucine zipper domain
CDD	cd14702	1.23E-7	50	77	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 144 aa Download sequence Send to blast
MALQHIGSGI ALVNCPEPIP IQHPVATSPD VDAAKADSSV DERRLRRRVS NRESARRCRA 60 RKQLRLHELR CMAARLEGAA RGRVAVARLA NAELRAEAAY LTLRLAAARR ALMLHQLYAA 120 TTAAGSGLGL GPVDIEQTIA SLIA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	55	62	RRCRARKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020152293.1	5e-15	ocs element-binding factor 1-like
TrEMBL	A0A3B6JEM0	1e-13	A0A3B6JEM0_WHEAT; Uncharacterized protein
TrEMBL	A0A453H285	1e-13	A0A453H285_AEGTS; Uncharacterized protein
STRING	BRADI1G12620.1	4e-11	(Brachypodium distachyon)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP22743	4	6