PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00014.1.g04950.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 234aa MW: 25842.6 Da PI: 10.2209

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00014.1.g04950.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	44.4	3.2e-14	127	177	9	59
EEEEE--TT-SS-E.EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 9 KYGqKevkgsefpr.sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 KYGq + k+++ + sYY+C +gCp kk v+ s d++ +ei+Y+++Hnh+ Zjn_sc00014.1.g04950.1.am.mk 127 KYGQMQLKNAKKSLwSYYKCMGNGCPIKKLVDLSC-DGTEMEIIYTDRHNHP 177 9******988754***************9.*************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00774	2.4E-6	51	178	IPR003657	WRKY domain
PROSITE profile	PS50811	8.983	127	179	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	1.0E-10	127	177	IPR003657	WRKY domain
SuperFamily	SSF118290	1.44E-9	127	178	IPR003657	WRKY domain
Pfam	PF03106	1.1E-9	127	177	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence Send to blast
MVPAASSLLP PNFSFIPTPP HRQHQQIMHR SSKLLGGGVP QPPLAISDQL AKDMYSWPKY 60 GQKQHEDTAR PAAPSYLQQA GLPPSLLWPP RSRMIPVMHP SGSALVGSCV SQPLLAAIVQ 120 PAKGRYKYGQ MQLKNAKKSL WSYYKCMGNG CPIKKLVDLS CDGTEMEIIY TDRHNHPRRP 180 QCGNDGRCPG RHREERGGWG LFRRSRGSFG HERPPRQEEA GCSSTPAASA AERG

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP62879	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12020.3	6e-12	WRKY family protein