PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00015.1.g01120.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 144aa    MW: 15041.3 Da    PI: 5.16
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00015.1.g01120.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like40.18e-135292751
                       G2-like 27 AtPktilelmkvkgLtlehvkSHLQ 51
                                  AtPk++lelm+vk+Ltl+hvkSHLQ
  Zjn_sc00015.1.g01120.1.am.mk  5 ATPKSVLELMDVKDLTLAHVKSHLQ 29
                                  9************************ PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015571.3E-8429IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.1E-10529IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MLAGATPKSV LELMDVKDLT LAHVKSHLQA RPIDGGGSGD EDLQNAEQAQ SAGDINRQPF  60
AAHRSASSEG ATSQAGGGDL ECSSGADDSD GSRARSTSSR MSQNLADQLA CSRYPTKIWE  120
ALAWSSRWGD QTGTGKNMTS SAKN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015696540.13e-22PREDICTED: probable transcription factor RL9
TrEMBLA0A3L6RKZ82e-20A0A3L6RKZ8_PANMI; Putative transcription factor RL9
TrEMBLJ3MX738e-21J3MX73_ORYBR; Uncharacterized protein
STRINGPavir.Fb00812.1.p1e-24(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3364634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.23e-11G2-like family protein