PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00015.1.g04390.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 168aa    MW: 18009.6 Da    PI: 10.3242
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00015.1.g04390.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.41e-10130162132
                                   TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg.tWktIartmg 32 
                                   +g+WT+eEde+l++++++ Gg+ +W+t +r  g
  Zjn_sc00015.1.g04390.1.am.mk 130 KGPWTPEEDEKLLQYIQKNGGHgSWRTLPRLAG 162
                                   79*******************9********999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.94E-7116158IPR009057Homeodomain-like
PROSITE profilePS5129412.669125168IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.8E-11128162IPR009057Homeodomain-like
PfamPF002494.4E-8130162IPR001005SANT/Myb domain
CDDcd001678.50E-5132163No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MPGSFLLLRS GRYSFPRRTR TSGEESRSGS FALTQTTASF FAAGSVQAAT TRTMLHSSSP  60
CVRAQAKPPL PGPVHKLQAT DHSPSPWPPL TCMSSKNLLL CVALAVVLFG VVGRGAMGRP  120
PCCDESGLKK GPWTPEEDEK LLQYIQKNGG HGSWRTLPRL AGTDGDRS
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4368723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.13e-20myb domain protein 93